BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008G07LP1|AL425923
(813 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1534 1612 0.0
>3x_Contig1534
Length = 9979
Score = 1612 bits (813), Expect = 0.0
Identities = 813/813 (100%)
Strand = Plus / Minus
Query: 1 gatcgcagtctgggcttaaaggtggaactgcatctttataaaacttgctgttttcgtctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9205 gatcgcagtctgggcttaaaggtggaactgcatctttataaaacttgctgttttcgtctg 9146
Query: 61 caagtttgatagtgtaaccctttaattcgtttgagaatcctgtaaatgagagctcattac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9145 caagtttgatagtgtaaccctttaattcgtttgagaatcctgtaaatgagagctcattac 9086
Query: 121 gattttttgtaaaaatgtcattctggtttaagtaacaggaagagtcttctttgccgtttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9085 gattttttgtaaaaatgtcattctggtttaagtaacaggaagagtcttctttgccgtttt 9026
Query: 181 gcttcatataaataacgatcgaatgtgcagcttctttgtttttgtcaatcaaatcacctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9025 gcttcatataaataacgatcgaatgtgcagcttctttgtttttgtcaatcaaatcacctt 8966
Query: 241 caacttgaacagcccaattctcgccactgtgcgatttcacaaacgtgaagttgagctgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8965 caacttgaacagcccaattctcgccactgtgcgatttcacaaacgtgaagttgagctgaa 8906
Query: 301 ggttactttcagaatctctgatggtctctctgccaccaattctcggatcataccagatcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8905 ggttactttcagaatctctgatggtctctctgccaccaattctcggatcataccagatcc 8846
Query: 361 atccgtatttatctaacttgtcaccttgctcaacaaaatgccgaacttttgccaaacctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8845 atccgtatttatctaacttgtcaccttgctcaacaaaatgccgaacttttgccaaacctt 8786
Query: 421 gtgcattgatgctattaaaccacatagcacccaagacaaacggctcatcattaacatacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8785 gtgcattgatgctattaaaccacatagcacccaagacaaacggctcatcattaacatacc 8726
Query: 481 gaggccttaaaccgaagtaacagtttgatctataaggggcccataaaagcgattgattat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8725 gaggccttaaaccgaagtaacagtttgatctataaggggcccataaaagcgattgattat 8666
Query: 541 ttgccttgctataatcatccagatctaatgctatactatggcctaaaatagcattaaggg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8665 ttgccttgctataatcatccagatctaatgctatactatggcctaaaatagcattaaggg 8606
Query: 601 ccgcaaacaaaagcagcctggacagagtaatcatttgtggctttttttagtagcaaatgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8605 ccgcaaacaaaagcagcctggacagagtaatcatttgtggctttttttagtagcaaatgt 8546
Query: 661 tatcttatgaatagccgtctgaaagtttttgtcagtggattttattgtacttggcagtgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8545 tatcttatgaatagccgtctgaaagtttttgtcagtggattttattgtacttggcagtgc 8486
Query: 721 aattgatctgtggctgtaagtatctcaactttaggaagtttaaatacgtaattcttcttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8485 aattgatctgtggctgtaagtatctcaactttaggaagtttaaatacgtaattcttcttt 8426
Query: 781 gaatataataaaagacaaaagtattcagaatga 813
|||||||||||||||||||||||||||||||||
Sbjct: 8425 gaatataataaaagacaaaagtattcagaatga 8393
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6107
Number of Sequences: 1807
Number of extensions: 6107
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 813
length of database: 10,358,551
effective HSP length: 16
effective length of query: 797
effective length of database: 10,329,639
effective search space: 8232722283
effective search space used: 8232722283
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)